FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005010197

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005010197
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences629849
Sequences flagged as poor quality0
Sequence length100-151
%GC45

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CTCACAG3405.924695E-415.0353061
CTCACGG4200.002916211712.1714381
CTTCGCT4800.00789375210.6500081
TCAGCGA6000.00408830179.6134562
CACAAAT6650.0085745658.78539851
AAGGATT10601.0071257E-48.1623683
CTCAAAA8700.0088224167.55468561
CTTTGAA12759.013006E-57.4460561
CTTTCCG10900.0085886096.69987441
CTTTCTT17808.159934E-45.74382451
Produced by FastQC (version 0.11.5)