FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005010199

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005010199
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences748352
Sequences flagged as poor quality0
Sequence length100-151
%GC47

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
ATATAGC6850.00113320639.4804836
CTCCAAT6350.00623723459.1333641
ATTTGCG8350.0068068117.7774036
CTTCTAT9400.00218291257.71234851
GATGCCC9850.0036128217.3255855
GTTTCAG10300.0053323237.03845361
Produced by FastQC (version 0.11.5)