FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005010200

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005010200
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences791471
Sequences flagged as poor quality0
Sequence length100-151
%GC49

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CTCCAAT5850.00316173829.9175181
CAAAAAT15602.1771024E-56.97325471
CATCTCC10550.00695732056.84805255
CTTTTTT25856.722348E-75.89152341
CAAAAAA19906.159833E-45.46647071
GGAAGAA21553.0790633E-45.3844531
Produced by FastQC (version 0.11.5)