FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005010202

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005010202
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences496551
Sequences flagged as poor quality0
Sequence length100-151
%GC49

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CACACGT1402.9043063E-530.8140967
CACGTCT1851.9348919E-423.3187759
ACACGTC1952.7633444E-422.122948
GCACACG3153.7305578E-415.9776796
AGCACAC2950.00444003514.6236385
GAGCACA3050.005539631514.1441764
AGAGCAC3150.006859728613.6951533
AAAGATG7800.00380461278.2961036
CTTCAAA8600.0087118947.56474351
CAAAAAG11800.0027202576.73846241
Produced by FastQC (version 0.11.5)