FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005010204

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005010204
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences1065068
Sequences flagged as poor quality0
Sequence length100-151
%GC49

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
AATTTAG4700.00778719710.6706635
CTCCAAG7700.00343940318.3911351
CAAAAGT11753.4931113E-47.33182861
GAAGATA16756.933589E-56.41665174
GATCTGC15500.0080961835.5467785
GTGGAAA19555.567587E-45.50824741
AAGATAA17100.0039791665.44676355
Produced by FastQC (version 0.11.5)