FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005010206

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005010206
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences1640558
Sequences flagged as poor quality0
Sequence length100-151
%GC46

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CCCAGGT6200.0050926099.362431
GTTTAAC8200.0055111447.9637751
CTCAGAT8600.0084437257.59336661
CTTTGGG13051.305756E-47.2280831
CGTTACC10100.00456649537.15273246
CTCGACG13251.5749304E-47.11897951
CCTCAAT11950.00299576886.6790561
TCAAGAC14756.1197125E-46.37025072
CTTAATT12750.0058950336.2599781
GTTTGAT19758.777437E-55.8781841
TCAGATA20409.013299E-45.31454752
Produced by FastQC (version 0.11.5)