FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005010208

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005010208
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences476107
Sequences flagged as poor quality0
Sequence length100-151
%GC47

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
ACACGTC2003.6077583E-421.2669188
CACACGT2105.0145003E-420.254217
CACGTCT2400.001230760517.7224319
GCACACG3407.4180635E-414.5949446
AGAGCAC3250.00923421713.0928343
CCTTGTT6100.0051595119.3451031
CCCGGAT6200.00589834769.1943761
CAAGAAA8400.0080236277.6346161
TGTAGCA3100.0089488665.497243445-49
CTCCAGT3100.0091032725.48869815-19
Produced by FastQC (version 0.11.5)