FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005010211

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005010211
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences733320
Sequences flagged as poor quality0
Sequence length100-151
%GC46

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CCTAAAT3200.007313142513.5645381
CCTAGAA700.00924073213.094723140-144
CTTCGAT7850.0038166958.294241
CTGAAAT11854.0808365E-57.93649531
CCAATAT9450.0025137097.6022293
CTTGAAA12450.004735996.39185761
CTTTTAT13850.0020738296.26809021
TTTGATT14600.00402999585.90675832
CAAAAAG16500.00232009335.6998461
Produced by FastQC (version 0.11.5)