Basic Statistics
Measure | Value |
---|---|
Filename | EGAF00005010220 |
File type | Conventional base calls |
Encoding | Sanger / Illumina 1.9 |
Total Sequences | 433896 |
Sequences flagged as poor quality | 0 |
Sequence length | 100-151 |
%GC | 47 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
No overrepresented sequences
Adapter Content
Kmer Content
Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
---|---|---|---|---|
CGTACGT | 50 | 0.0016109514 | 17.028378 | 40-44 |
TTTAATC | 475 | 0.009160499 | 10.437221 | 7 |
CAGATTT | 635 | 0.007529367 | 8.924767 | 3 |
CAAAGAT | 645 | 0.008318408 | 8.816892 | 1 |
CTTTTCT | 1065 | 0.0010973227 | 7.3422356 | 1 |