FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005010224

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005010224
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences549153
Sequences flagged as poor quality0
Sequence length100-151
%GC48

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CATTCGG4603.9526934E-412.7159741
CGTTTGT4750.007236171510.7751151
TCATTAT8250.0060486767.8797673
CATCAAT11000.00114840557.3116851
TTTTATT16556.9846956E-66.98307562
CTTTTCT13400.00126575056.54777771
TTTATTT15108.157145E-46.218583
Produced by FastQC (version 0.11.5)