FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005010228

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005010228
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences874041
Sequences flagged as poor quality0
Sequence length100-151
%GC47

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
TAAGCCA4700.00735623410.75246059
CTAAAGA5550.0020359710.4579551
CTTCGAG6200.00509249379.3615561
CTTCCAT12405.733908E-47.02116731
CTTTTAT16856.329788E-56.45864061
CTGCAAT13150.0081186656.0689941
TCCTGTT13200.0088278176.0200462
CTGAAAA19658.146174E-55.9075471
Produced by FastQC (version 0.11.5)