FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005010240

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005010240
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences1103464
Sequences flagged as poor quality0
Sequence length100-151
%GC47

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CTGGAAT11553.0055802E-58.1341111
CCAAAAT11904.3647822E-57.8948731
TGGAATT12200.0039752966.50064472
CTTCGGA12400.0045963676.4109111
AAATACG12850.0068707656.16790256
CAATATA14100.00264530056.13433554
CTTTTCT24205.2964482E-55.3753391
Produced by FastQC (version 0.11.5)