FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005010244

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005010244
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences885132
Sequences flagged as poor quality0
Sequence length100-151
%GC47

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CTAATCT3000.004749957514.4776031
CCTCGAA4250.00340563211.9227321
CCCGGTT7300.00196680228.924551
CAAAGAT15050.00521361275.7718021
CCTCTTT15550.00748405055.5862141
Produced by FastQC (version 0.11.5)