FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005010247

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005010247
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences1986795
Sequences flagged as poor quality0
Sequence length100-151
%GC47

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GTCCAAC8400.0067596447.7847091
CCCCCAC10150.00453270467.15835331
CTTCGAT18251.8641527E-45.9718321
GTCAGAA22801.1520999E-45.4174291
CTGGAAT29055.607655E-65.2523341
CCCCCCC3600.00653046975.223083110-114
TCAAATT27206.0878316E-55.0518142
Produced by FastQC (version 0.11.5)