FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005010251

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005010251
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences567589
Sequences flagged as poor quality0
Sequence length100-151
%GC45

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CTCCTAA3300.001045842118.156868145
TCGGGTG2000.00837993617.945194
CCCGGAT6204.6068028E-410.4557341
GTTAAAT6456.629547E-410.0504731
CTTTTAT14500.00363578835.9609711
Produced by FastQC (version 0.11.5)