FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005010254

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005010254
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences753936
Sequences flagged as poor quality0
Sequence length100-151
%GC45

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
TAAGTAC3100.006199558313.9073599
CTCCCCG4755.5618834E-412.2119921
CTTAAAT5350.001506788910.84242251
TTTGGAG8205.8189027E-59.6390455
CTCCGAA7000.0013212019.3225481
CATAGAT7050.00140987319.2564311
GGACAAA10205.616569E-47.81956621
CTTTTAT17208.471013E-56.32343341
CTTCAAA14600.00364936755.9596191
TTCAAAT16000.00174346815.8381942
Produced by FastQC (version 0.11.5)