FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005010260

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005010260
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences448859
Sequences flagged as poor quality0
Sequence length100-151
%GC47

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
TACGCAC2050.00949940917.5577959
TCAAAAC5750.002885999210.025632
TGAATCT5850.00335055159.8465653
TTCCGGA8951.4621232E-48.856442
AAAGATT10357.001919E-47.65846632
TACTATA3150.0090926515.48924645-49
Produced by FastQC (version 0.11.5)