FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005010262

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005010262
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences648838
Sequences flagged as poor quality0
Sequence length100-151
%GC49

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GTAGATA4604.7336397E-412.4476251
GTTTATT8156.0343987E-48.7820661
TTCAAGC7400.00252196878.6827492
TCCAGCC8400.0080285787.634947
TTCTCTT11000.00150995457.12594467
TATTTCC12950.00115155386.60319145
Produced by FastQC (version 0.11.5)