FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005010273

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005010273
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences1058839
Sequences flagged as poor quality0
Sequence length100-151
%GC46

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CCCGCAT7853.8242422E-49.1936261
CCCCCCC1650.00456477848.133046135-139
TCAGATC10400.0064078516.9069642
CCAAAAG11700.002536256.7852111
CAAAACC13750.00207953786.26723533
CAAATCC18050.0073059215.17206053
Produced by FastQC (version 0.11.5)