FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005010279

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005010279
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences871667
Sequences flagged as poor quality0
Sequence length100-151
%GC47

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GTTCAAT7200.00171533559.0597281
CTTTTGA13200.00118151376.5888931
CAATGAT13150.0082050956.0627841
CAACAAG16950.0031261055.5587711
CAAAAAT19450.0027551655.21691271
Produced by FastQC (version 0.11.5)