FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005010280

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005010280
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences1717185
Sequences flagged as poor quality0
Sequence length100-151
%GC48

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
TCACTCA6650.0093015288.7000558
CCCTCGT9201.8344187E-48.6767011
CCCCTGG7650.00294343488.5375021
CCCACGA9803.6297727E-48.14547351
CCCAGAA14105.207463E-67.72008131
CCCAAAT11402.1796608E-47.63881731
CTCGATC9600.00274766077.53478862
CCCACAC8700.0093507357.50711441
CTTCGTT16801.045406E-67.3432681
CTCCACT10400.0058090176.97776651
CTCAGCA12506.278745E-46.96660141
CCCCGCT11700.0023955196.8227051
CCCAGTT12150.00356024556.5700121
CTTCAAA30101.9463187E-106.50949051
CATAAAT22804.4356966E-76.3656811
CTCAAAT12700.005651336.2854841
CCCACCG12800.0061314386.2363781
CCTCATT15158.057393E-46.2270231
CTATGAT16403.1071517E-46.1948951
CCCATAT14200.00265623966.13257171
Produced by FastQC (version 0.11.5)