FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005010392

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005010392
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences946078
Sequences flagged as poor quality0
Sequence length100-151
%GC47

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CTCAAAT7200.0017156059.0597331
ATCTCTC6600.0088782718.74898056
CCCAAAG8650.0089744047.541051
GCCGAAC10550.007023876.84161956
CATTTTG14800.0044707915.8523595
Produced by FastQC (version 0.11.5)