FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005010399

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005010399
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences619238
Sequences flagged as poor quality0
Sequence length100-151
%GC46

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GAATTGT6507.1927963E-49.9619886
CTTTGAC7050.00127364949.3594661
CGGGAAT6700.0088280848.75412751
TTCAATT9300.00211614637.73631142
CTTTTAT11400.00163028627.07433271
Produced by FastQC (version 0.11.5)