FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005010430

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005010430
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences1286758
Sequences flagged as poor quality0
Sequence length100-151
%GC46

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CCCACGA5650.002448723710.2288741
AATTCAG13200.00125468096.55464035
AGAGTTT12100.00364691836.554643
CGAAATT12500.0050190076.3572451
CAAATGT13050.0078495296.08931541
CTTTAAA19005.331901E-56.08348851
CTTTTAT28103.3860306E-65.3988251
CTTTGAT21703.598422E-45.32655671
Produced by FastQC (version 0.11.5)