FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005010501

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005010501
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences1559044
Sequences flagged as poor quality0
Sequence length100-151
%GC46

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
ATGTCGC8550.0083974377.59799778
GGTTCCC10400.00611808666.9404787
GGGTTTG10500.0067123316.8743785
CCCGCAA15151.1219064E-46.70049051
CTCTGAT12150.00359063396.56458951
ATCGGAG12250.0039121746.5110011
TCAAGGT14600.00382527175.93553833
GGAATCT15050.00512492245.78143841
GTTCAAA16450.00218312585.7301851
CTTTAAT21600.00184747755.0353391
Produced by FastQC (version 0.11.5)