FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005010510

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005010510
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences638780
Sequences flagged as poor quality0
Sequence length100-151
%GC44

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CTTAGAG1307.996917E-426.8990971
GTTAGTA1650.00329811721.0870552
CTCCAAT5600.00297262859.9910941
CTGCCAT10852.065005E-58.3796261
GATTTTC14350.00475600185.8191455
Produced by FastQC (version 0.11.5)