FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005010516

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005010516
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences1066719
Sequences flagged as poor quality0
Sequence length100-151
%GC48

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
ATCTAAG3850.001671732813.1088126
CTTCGAA7200.00170838759.0641441
CTCGCAG8000.0044360038.157731
CCCGTTT10004.5434377E-47.97644761
GTATCTT11350.0017514397.02770661
CTTCCAC11550.0021061146.9060151
AGATTGC10900.0097314646.61453726
CTTTCAT16603.6636624E-46.1155671
Produced by FastQC (version 0.11.5)