FastQCFastQC Report
Fri 1 Jul 2022
EGAF00005010524

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005010524
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences42168606
Sequences flagged as poor quality0
Sequence length30-100
%GC44

[OK]Per base sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
AAGTCGGAGGCCAAGCGGTCTTAGGAAGACAATTAGAGCTCCCAACTCCT815240.1933286578171448No Hit
AGTCGGAGGCCAAGCGGTCTTAGGAAGACAATTAGAGCTCCCAACTCCTT678600.160925405027617No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)