FastQCFastQC Report
Tue 28 Jun 2022
EGAF00005010541

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005010541
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences60078559
Sequences flagged as poor quality0
Sequence length30-100
%GC45

[OK]Per base sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
AGTCGGAGGCCAAGCGGTCTTAGGAAGACAAACCTAATTGACAACTCCTT2919010.48586551485031454No Hit
AAGTCGGAGGCCAAGCGGTCTTAGGAAGACAAACCTAATTGACAACTCCT1422610.23679163143709886No Hit
AGTCGGAGGGCCAAGCGGTCTTAGGAAGACAAACCTAATTGACAACTCCT861730.14343386631493607No Hit

[OK]Adapter Content

Adapter graph