FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005010545

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005010545
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences750678
Sequences flagged as poor quality0
Sequence length100-151
%GC47

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CTAAAGC2952.529547E-416.8150521
ATTTAAC4100.00309887312.0736536
CTTTAAA7800.0043418438.176551
CATAAAC7950.00515374178.0222761
AAAGCAG13000.009392535.98375565
Produced by FastQC (version 0.11.5)