FastQCFastQC Report
Thu 16 Jun 2022
EGAF00005010550

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005010550
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences67346723
Sequences flagged as poor quality0
Sequence length30-100
%GC45

[OK]Per base sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
AGTCGGAGGCCAAGCGGTCTTAGGAAGACAACCTAGCGAATCAACTCCTT3026420.4493789549344517No Hit
AAGTCGGAGGCCAAGCGGTCTTAGGAAGACAACCTAGCGAATCAACTCCT967790.1437026119296109No Hit
CGGAGGCCAAGCGGTCTTAGGAAGACAACCT759080.11271223991106442No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)