FastQCFastQC Report
Sat 4 Jun 2022
EGAF00005010552

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005010552
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences43822236
Sequences flagged as poor quality0
Sequence length30-100
%GC45

[OK]Per base sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
AGTCGGAGGCCAAGCGGTCTTAGGAAGACAAGTAGTCATCGCAACTCCTT7425231.694397793850592No Hit
AAGTCGGAGGCCAAGCGGTCTTAGGAAGACAAGTAGTCATCGCAACTCCT2737480.6246783025859292No Hit
CGGAGGCCAAGCGGTCTTAGGAAGACAAGTA758800.17315410377507892No Hit
AGTCGGAGGGCCAAGCGGTCTTAGGAAGACAAGTAGTCATCGCAACTCCT517640.11812268091477578No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)