FastQCFastQC Report
Thu 16 Mar 2023
EGAF00005010557

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005010557
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences68414649
Sequences flagged as poor quality0
Sequence length30-100
%GC46

[OK]Per base sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
AGTCGGAGGCCAAGCGGTCTTAGGAAGACAAGTTCGCTCTACAACTCCTT8055941.1775168209954567No Hit
AAGTCGGAGGCCAAGCGGTCTTAGGAAGACAAGTTCGCTCTACAACTCCT2800820.409388930724471No Hit
CGGAGGCCAAGCGGTCTTAGGAAGACAAGTT1369850.20022758576164001No Hit
AGTCGGAGGGCCAAGCGGTCTTAGGAAGACAAGTTCGCTCTACAACTCCT840600.12286842252161523No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)