FastQCFastQC Report
Fri 24 Mar 2023
EGAF00005010560

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005010560
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences59001679
Sequences flagged as poor quality0
Sequence length30-100
%GC46

[OK]Per base sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
AGTCGGAGGCCAAGCGGTCTTAGGAAGACAATCTCACACATCAACTCCTT2268080.384409399603696No Hit
AAGTCGGAGGCCAAGCGGTCTTAGGAAGACAATCTCACACATCAACTCCT1480950.2510013316739681No Hit
CGGAGGCCAAGCGGTCTTAGGAAGACAATCT1305160.22120726428819085No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)