FastQCFastQC Report
Thu 16 Jun 2022
EGAF00005010562

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005010562
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences68368764
Sequences flagged as poor quality0
Sequence length30-100
%GC44

[OK]Per base sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
AGTCGGAGGCCAAGCGGTCTTAGGAAGACAATTAGATGCATCAACTCCTT17762992.5981148350144223No Hit
AAGTCGGAGGCCAAGCGGTCTTAGGAAGACAATTAGATGCATCAACTCCT8916681.3042037735244123No Hit
CGGAGGCCAAGCGGTCTTAGGAAGACAATTA2643990.3867248499621845No Hit
AGTCGGAGGGCCAAGCGGTCTTAGGAAGACAATTAGATGCATCAACTCCT2265000.33129164072645806No Hit
GGCCAAGCGGTCTTAGGAAGACAATTAGATG1150100.1682200953640174No Hit
AGACAATTAGATGCATCAACTCCTTGGCTCA1131820.16554635973819856No Hit
CTTAGGAAGACAATTAGATGCATCAACTCCT987400.14442267816922946No Hit
CGGAGGCCAAGCGGGCTTAGGAAGACAATTA833660.12193580097484284No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)