FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005010564

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005010564
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences473714
Sequences flagged as poor quality0
Sequence length100-151
%GC46

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
ACCCAAT1852.0757386E-423.0778456
ATGCGCG3000.005317967414.23133856
TCGCGCA4600.00697458810.8281934
ATAATAG5550.002389099410.2568213
CTCCGGC9704.0085943E-58.8299191
TAACTGC2950.00134769476.513832140-144
CAAAAAG12650.0064209996.20653631
GAGCGCA3950.00191352245.3717437125-129
Produced by FastQC (version 0.11.5)