FastQCFastQC Report
Sat 2 Jul 2022
EGAF00005010565

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005010565
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences66147607
Sequences flagged as poor quality0
Sequence length30-100
%GC46

[OK]Per base sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
AAGTCGGAGGCCAAGCGGTCTTAGGAAGACAACACGTGATAGCAACTCCT5777740.8734616809342778No Hit
AGTCGGAGGCCAAGCGGTCTTAGGAAGACAACACGTGATAGCAACTCCTT4916090.7431999769848061No Hit
AGTCGGAGGGCCAAGCGGTCTTAGGAAGACAACACGTGATAGCAACTCCT690720.10442101102765516No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)