FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005010570

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005010570
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences3296596
Sequences flagged as poor quality0
Sequence length100-151
%GC45

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CCTCACA12400.0064089156.21026231
TTAGTTA18054.0184026E-56.20378162
CCCAGAT22552.866212E-55.5881091
GTTTAAT26902.7165643E-65.46519851
CCTGGAT21856.198916E-45.1263411
CTTACAG22157.509457E-45.05690961
CCCAAAT19550.00453928165.013261
Produced by FastQC (version 0.11.5)