FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005010614

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005010614
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences1006453
Sequences flagged as poor quality0
Sequence length100-151
%GC48

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
AACAATT12506.746166E-46.92217356
CTTCGAC10850.0083641356.71915251
AGAATAC12300.0043256216.44818165
CTGCAAA20701.6098548E-45.63499931
AATTTTA17450.00468707135.3715255
CAAAGAA23208.118123E-45.02777961
Produced by FastQC (version 0.11.5)