FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005010639

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005010639
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences439951
Sequences flagged as poor quality0
Sequence length100-151
%GC47

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CTAAAAC3150.0061481113.9229751
ATCACGA4150.002645361712.3293811
GTCCTTT4950.0098408510.3367551
TTCAATA8054.442354E-59.8769132
CTCCTTT7502.1222747E-49.7460821
ATTTCCG8500.0078560487.65241676
Produced by FastQC (version 0.11.5)