FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005010675

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005010675
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences1361775
Sequences flagged as poor quality0
Sequence length100-151
%GC45

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
ACACGAG2800.003323090515.277585
AGCGTCC8800.0059855589.179733145
ATCTGAG6350.00716479178.9814366
ATGATTC14958.494011E-46.1995985
CCTGAAT15900.00170430975.85023451
CAAGAAT20952.5004984E-45.46465831
CAAAGCT17550.00548868775.3002121
TTTAAAG21804.568099E-45.2376892
Produced by FastQC (version 0.11.5)