FastQCFastQC Report
Thu 23 Feb 2023
EGAF00005010691

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005010691
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences92822545
Sequences flagged as poor quality0
Sequence length30-100
%GC47

[OK]Per base sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
AAGTCGGAGGCCAAGCGGTCTTAGGAAGACAACGAATGCAACCAACTCCT2194300.2363973105887153No Hit
AGTCGGAGGCCAAGCGGTCTTAGGAAGACAACGAATGCAACCAACTCCTT1303950.1404777255353212No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)