FastQCFastQC Report
Fri 2 Jun 2023
EGAF00005010707

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005010707
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences54028170
Sequences flagged as poor quality0
Sequence length30-100
%GC45

[OK]Per base sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
AGTCGGAGGCCAAGCGGTCTTAGGAAGACAAGGAAGTGGCACAACTCCTT2460710.45544944424362327No Hit
AAGTCGGAGGCCAAGCGGTCTTAGGAAGACAAGGAAGTGGCACAACTCCT1158440.21441407325104664No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)