FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005010716

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005010716
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences2862928
Sequences flagged as poor quality0
Sequence length100-151
%GC48

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
AAACTAA13500.00160199176.41509875
CAATTGT19956.82722E-45.42630534
CCCGGTT22801.19464545E-45.40468451
CTTTGGT25752.369444E-55.3485081
GTTCGAT21903.914126E-45.29580641
CTACAAT24757.229288E-55.27173471
CTTTGAT44705.657057E-105.189181
CGAATAT28302.0681515E-55.12271071
GTCAGAA29759.029502E-65.11668351
Produced by FastQC (version 0.11.5)