FastQCFastQC Report
Sat 4 Jun 2022
EGAF00005010718

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005010718
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences45503829
Sequences flagged as poor quality0
Sequence length30-100
%GC45

[OK]Per base sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
AGTCGGAGGCCAAGCGGTCTTAGGAAGACAAGAGTCAGCTGCAACTCCTT11262532.475073031766184No Hit
AAGTCGGAGGCCAAGCGGTCTTAGGAAGACAAGAGTCAGCTGCAACTCCT3279470.720701987518457No Hit
CGGAGGCCAAGCGGTCTTAGGAAGACAAGAG791560.17395459182127287No Hit
AGTCGGAGGGCCAAGCGGTCTTAGGAAGACAAGAGTCAGCTGCAACTCCT649000.1426253601647457No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)