FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005010744

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005010744
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences909712
Sequences flagged as poor quality0
Sequence length100-151
%GC46

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CTAAGAT3001.1437536E-519.2569271
CTCAAAC6406.035191E-410.1550221
CTTGGTT5700.002641653610.1352251
CGACAAT6500.00780355848.8878141
CTTCGAC8205.8752124E-48.8065221
CTTTAAC7800.003663878.3323261
GGTTATT8650.0092712277.51354171
CAATTCT9800.00341318347.3687231
CTTCAAT15001.3342218E-57.22134831
CTCCCGG10200.00504020047.07975341
CCCGCCG12758.3083205E-46.79656361
CTTTAAT11800.0027550716.73176531
CTTATAT12250.0040781796.4844761
CTTTCAG15007.568419E-46.2585021
ATCAAAT16202.8198748E-46.24067161
CTTCACC13900.00220554656.23425771
CAAAGAT15550.00116789956.0371411
CAAAGAA22204.988186E-45.20457551
Produced by FastQC (version 0.11.5)