FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005010794

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005010794
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences879386
Sequences flagged as poor quality0
Sequence length100-151
%GC46

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
ATAACCA8601.3309058E-48.9357838
CCCATTT10801.7315328E-47.7911931
CAACTTT10900.00162729637.07640461
TCAGATT10150.0065599896.88996552
TTTTGTG11350.00259270266.77072537
AGAAATG12750.0012073766.57632884
ACTTTTT17450.0067271335.20843743
Produced by FastQC (version 0.11.5)