FastQCFastQC Report
Sat 2 Jul 2022
EGAF00005010796

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005010796
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences64759845
Sequences flagged as poor quality0
Sequence length30-100
%GC46

[OK]Per base sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
AGTCGGAGGCCAAGCGGTCTTAGGAAGACAAAGAATTAATGCAACTCCTT11422311.7637951418815163No Hit
AAGTCGGAGGCCAAGCGGTCTTAGGAAGACAAAGAATTAATGCAACTCCT5820370.8987621882047433No Hit
CGGAGGCCAAGCGGTCTTAGGAAGACAAAGA2673120.41277430481805505No Hit
CGGAGGCCAAGCGGTCTTAGGAAGACAAAAA1533580.23681032590488751No Hit
AGTCGGAGGGCCAAGCGGTCTTAGGAAGACAAAGAATTAATGCAACTCCT804130.12417108163245295No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)