FastQCFastQC Report
Sun 5 Mar 2023
EGAF00005010797

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005010797
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences72506602
Sequences flagged as poor quality0
Sequence length30-100
%GC45

[OK]Per base sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
AGTCGGAGGCCAAGCGGTCTTAGGAAGACAAACCAGCGTCACAACTCCTT2122900.29278713130150547No Hit
AAGTCGGAGGCCAAGCGGTCTTAGGAAGACAAACCAGCGTCACAACTCCT1836580.2532983134418573No Hit
CGGAGGCCAAGCGGTCTTAGGAAGACAAACC1280870.17665563751008495No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)