FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005010807

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005010807
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences1318147
Sequences flagged as poor quality0
Sequence length100-151
%GC45

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CCCCTAT4250.003453118511.9013941
CTCGAAT4700.007311753510.7618991
CCAGTCT7400.00236419228.7461873
CTCCGAA9402.4240177E-48.4557771
GGTCGAT10105.2522967E-47.86973331
CTTCTGT20651.7680782E-45.59871861
CTTTAAA21503.1445792E-45.37737371
CAAAGCT20950.00128905525.1736371
Produced by FastQC (version 0.11.5)